Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820785.1_cds_XP_016500536.1_14360
CDS Infomation

[gene=LOC107818971] [db_xref=GeneID:107818971] [protein=putative pentatricopeptide repeat-containing protein At1g74400] [protein_id=XP_016500536.1] [location=127899..128867] [gbkey=CDS]
Sequence

ATGGATATGTACGATGCAACTGCAAATGTCGCTGATGTTCATCAGGTGTTTGATGAAATA
CCCAATAAGAATGTCGTGTGCTGGACTTCGCTGATTTCCTCGTATGTGCAGAATCAGAAA
CCAAACAGAGCCATAGAGATATTCAGGAAAATGCAAATGGATGACGTGGAGCCTGATCAG
GTAACATTCACTGTTGCATTATCGGCCTGTGCTGATCTGGGGGCATTGGATAAAGGGGAG
TGGATTCATGATTTGATAAGTCGAAAGCCGGAGTTTAGTGAGGATTTATGTTTAATGAAT
GCTCTGTTGAACATGTATGTAAAATGTGGGGATATCAGAAAAGCTAAGTTGCTGTTTGAT
AGTGTTAAAATAAAGGATGTTAGGACTTGGACTTGCATGATTGTTGGGCATGCATTACAC
GGCCAAGCAGAGGAAGCGCTAAGGCTGTTTTCAGCATTGGAAGCAGAAAACAAGTCAAGA
TCAAGTAAAAGCCGAGGGACTAAGAACCAATTACTTGTTCCCAATGATGTCATGTTTATA
GGGGTTTTAATGGCTTGTAGCCATGCGGGAATGGTGGAAGAGGGGAAAAGGTATTTTAGA
AGTATGATTGAGGAGTATGGCTTAAAGCCTAGGCTTTCTCACTTTGGCTGCTTGGTGGAT
ATGTTATGCCGTTGTGGGCTGCTAAACGAGGCGTATAGTATTATTTTGGCAATGCCAATT
CAGCCAAATGCAGTAATATGGAGGACATTACTGGGTGCCTCTGGCGTTCATGGCAATGTA
GAACTTGCTGCAGTGGCTCGGTCTAAATTAGGCAAGTTAGAGGTTAGTGTCGTTGGTGAT
GATGTTGCATTGTCTAATATTTATGCTGCCAAAGGCATGTGGGAGGAGAAAGTAATGCTT
AGACATGAGATGAGACAAAGGAGAACTCCTGGCTGCAGTTCAGTTGGGGTGGGAAAGTTG
CATTCTTGA

Peptide Sequence

PEP ID

XP_016500536.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At1g74400 [Nicotiana tabacum]
Sequence

MDMYDATANVADVHQVFDEIPNKNVVCWTSLISSYVQNQKPNRAIEIFRKMQMDDVEPDQ
VTFTVALSACADLGALDKGEWIHDLISRKPEFSEDLCLMNALLNMYVKCGDIRKAKLLFD
SVKIKDVRTWTCMIVGHALHGQAEEALRLFSALEAENKSRSSKSRGTKNQLLVPNDVMFI
GVLMACSHAGMVEEGKRYFRSMIEEYGLKPRLSHFGCLVDMLCRCGLLNEAYSIILAMPI
QPNAVIWRTLLGASGVHGNVELAAVARSKLGKLEVSVVGDDVALSNIYAAKGMWEEKVML
RHEMRQRRTPGCSSVGVGKLHS

Transcript Sequence

Gene sequence data has not been registered.